Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 MIR943-201ENST00000401286 94 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC114501.2-201ENST00000439631 535 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC092337.1-201ENST00000568699 1129 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC009407.1-201ENST00000568958 598 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC000095.1-201ENST00000603208 874 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 AC139530.3-201ENST00000620344 690 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 KRT18P28-201ENST00000453838 1332 ntBASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD1LQ86WJ1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 AL390755.1-201ENST00000623716 2027 ntBASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD1LQ86WJ1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CHD1LQ86WJ1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 AC241585.1-201ENST00000433527 519 ntBASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 METTL21AP1-201ENST00000438852 635 ntBASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms