Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 REXO1L1P-202ENST00000608646 1974 ntBASIC16.33■□□□□ 0.2
RNF43Q68DV7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 MEP1AP4-201ENST00000423244 1087 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC022210.1-201ENST00000449856 793 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 PHKG1P2-201ENST00000457537 863 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC055876.2-201ENST00000531834 546 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC023310.3-201ENST00000557027 670 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC100756.1-201ENST00000562736 682 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 RRP7BP-205ENST00000566851 833 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC138749.3-201ENST00000567691 622 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 AC116165.1-201ENST00000611806 668 ntBASIC16.32■□□□□ 0.2
RNF43Q68DV7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF43Q68DV7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF43Q68DV7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 LINC01115-203ENST00000606068 577 ntBASIC16.31■□□□□ 0.2
RNF43Q68DV7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF43Q68DV7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF43Q68DV7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF43Q68DV7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF43Q68DV7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF43Q68DV7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF43Q68DV7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF43Q68DV7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF43Q68DV7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF43Q68DV7 AC005089.1-201ENST00000619486 2241 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms