Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC092337.1-201ENST00000568699 1129 ntBASIC18.57■□□□□ 0.56
RNF20Q5VTR2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC093512.1-201ENST00000617969 520 ntBASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC004461.2-201ENST00000629517 803 ntBASIC18.57■□□□□ 0.56
RNF20Q5VTR2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF20Q5VTR2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 MROH4P-201ENST00000431302 1578 ntBASIC18.55■□□□□ 0.56
RNF20Q5VTR2 CICP11-201ENST00000434745 2827 ntBASIC18.55■□□□□ 0.56
RNF20Q5VTR2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 AP002414.2-201ENST00000591780 3365 ntBASIC18.55■□□□□ 0.56
RNF20Q5VTR2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 AL645728.2-202ENST00000641679 227 ntBASIC18.55■□□□□ 0.56
RNF20Q5VTR2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF20Q5VTR2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 GHSR-202ENST00000427970 912 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms