Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRK2Q5S007 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
LRRK2Q5S007 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRK2Q5S007 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
LRRK2Q5S007 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AL583805.1-201ENST00000391389 531 ntBASIC13.2□□□□□ -0.3
LRRK2Q5S007 AL645937.2-201ENST00000396808 931 ntBASIC13.2□□□□□ -0.3
LRRK2Q5S007 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 CHCHD2P2-201ENST00000503744 321 ntBASIC13.2□□□□□ -0.3
LRRK2Q5S007 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.2□□□□□ -0.3
LRRK2Q5S007 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRK2Q5S007 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRK2Q5S007 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 AC008723.1-201ENST00000506922 207 ntBASIC13.19□□□□□ -0.3
LRRK2Q5S007 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 AL627230.2-201ENST00000613254 655 ntBASIC13.19□□□□□ -0.3
LRRK2Q5S007 CR392039.1-201ENST00000623217 204 ntBASIC13.19□□□□□ -0.3
LRRK2Q5S007 AC233280.19-201ENST00000633223 136 ntBASIC13.19□□□□□ -0.3
LRRK2Q5S007 AL603764.1-201ENST00000636452 321 ntBASIC13.19□□□□□ -0.3
LRRK2Q5S007 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms