Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX3P78415 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
IRX3P78415 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
IRX3P78415 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
IRX3P78415 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 AC106886.4-201ENST00000623557 2502 ntBASIC18.11■□□□□ 0.49
IRX3P78415 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
IRX3P78415 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX3P78415 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.11■□□□□ 0.49
IRX3P78415 AC023310.1-201ENST00000554836 735 ntBASIC18.11■□□□□ 0.49
IRX3P78415 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
IRX3P78415 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 DUX4L45-201ENST00000566406 1057 ntBASIC18.11■□□□□ 0.49
IRX3P78415 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX3P78415 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX3P78415 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX3P78415 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX3P78415 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IRX3P78415 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX3P78415 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX3P78415 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.1■□□□□ 0.49
IRX3P78415 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.1■□□□□ 0.49
IRX3P78415 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 AC068587.10-201ENST00000641210 219 ntBASIC18.1■□□□□ 0.49
IRX3P78415 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 AC018892.3-201ENST00000623986 2499 ntBASIC18.1■□□□□ 0.49
IRX3P78415 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IRX3P78415 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX3P78415 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX3P78415 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IRX3P78415 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
IRX3P78415 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX3P78415 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms