Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 CICP11-201ENST00000434745 2827 ntBASIC13.98□□□□□ -0.17
VBP1P61758 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.98□□□□□ -0.17
VBP1P61758 RNU1-129P-201ENST00000384064 167 ntBASIC13.98□□□□□ -0.17
VBP1P61758 AC113347.1-201ENST00000413321 391 ntBASIC13.98□□□□□ -0.17
VBP1P61758 POM121L3P-201ENST00000419331 1163 ntBASIC13.98□□□□□ -0.17
VBP1P61758 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 BX276092.5-203ENST00000456199 560 ntBASIC13.98□□□□□ -0.17
VBP1P61758 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.98□□□□□ -0.17
VBP1P61758 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 AC139887.3-201ENST00000568585 713 ntBASIC13.98□□□□□ -0.17
VBP1P61758 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
VBP1P61758 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 U1.21-201ENST00000580816 167 ntBASIC13.98□□□□□ -0.17
VBP1P61758 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VBP1P61758 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VBP1P61758 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VBP1P61758 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.98□□□□□ -0.17
VBP1P61758 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.97□□□□□ -0.17
VBP1P61758 KRT18P1-202ENST00000452408 1331 ntBASIC13.97□□□□□ -0.17
VBP1P61758 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VBP1P61758 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.97□□□□□ -0.17
VBP1P61758 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.97□□□□□ -0.17
VBP1P61758 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.97□□□□□ -0.17
VBP1P61758 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
VBP1P61758 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.97□□□□□ -0.17
VBP1P61758 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.97□□□□□ -0.17
VBP1P61758 AP001269.4-201ENST00000609611 512 ntBASIC13.97□□□□□ -0.17
VBP1P61758 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.97□□□□□ -0.17
VBP1P61758 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VBP1P61758 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VBP1P61758 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.96□□□□□ -0.17
VBP1P61758 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.96□□□□□ -0.17
VBP1P61758 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.96□□□□□ -0.17
VBP1P61758 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.96□□□□□ -0.17
VBP1P61758 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms