Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 FOXO1B-201ENST00000504678 1527 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 AC013726.1-201ENST00000563747 2285 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 AC007686.3-201ENST00000619017 3487 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.7□□□□□ -0.22
SEC61A1P61619 AC105233.2-201ENST00000523697 349 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 AF228730.5-201ENST00000530288 346 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 ALG1L8P-201ENST00000533887 760 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 DUX4L27-201ENST00000554796 1261 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 MIR6080-201ENST00000617359 66 ntBASIC13.7□□□□□ -0.22
SEC61A1P61619 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.7□□□□□ -0.22
SEC61A1P61619 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.7□□□□□ -0.22
SEC61A1P61619 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SEC61A1P61619 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SEC61A1P61619 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 AC041040.2-201ENST00000622926 2899 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 CNN2P2-201ENST00000443536 909 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 CNN2P3-201ENST00000450201 906 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 AC069262.1-201ENST00000539058 672 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.69□□□□□ -0.22
SEC61A1P61619 AL136317.3-201ENST00000618497 906 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.69□□□□□ -0.22
SEC61A1P61619 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
SEC61A1P61619 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.69□□□□□ -0.22
SEC61A1P61619 AC079781.5-202ENST00000641784 3743 ntBASIC13.69□□□□□ -0.22
SEC61A1P61619 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SEC61A1P61619 AL592424.1-201ENST00000563624 1536 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms