Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN20P56880 GNAQP1-201ENST00000444815 1067 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 SPTLC1P1-201ENST00000447199 261 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 AC074044.1-201ENST00000609673 707 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 AC004790.1-201ENST00000612686 536 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLDN20P56880 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN20P56880 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.29□□□□□ -0.12
CLDN20P56880 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN20P56880 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CLDN20P56880 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN20P56880 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN20P56880 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN20P56880 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN20P56880 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.28□□□□□ -0.12
CLDN20P56880 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 TARDBPP1-201ENST00000442013 1203 ntBASIC14.28□□□□□ -0.12
CLDN20P56880 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.28□□□□□ -0.12
CLDN20P56880 C8orf49-201ENST00000525043 1968 ntBASIC14.28□□□□□ -0.12
CLDN20P56880 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN20P56880 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN20P56880 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 HNRNPUP1-201ENST00000554987 333 ntBASIC14.28□□□□□ -0.12
CLDN20P56880 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN20P56880 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN20P56880 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
CLDN20P56880 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLDN20P56880 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN20P56880 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN20P56880 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN20P56880 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN20P56880 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN20P56880 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN20P56880 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN20P56880 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN20P56880 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN20P56880 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN20P56880 Z97205.2-201ENST00000564697 1639 ntBASIC14.27□□□□□ -0.12
CLDN20P56880 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN20P56880 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms