Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CLCN4P51793 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CLCN4P51793 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLCN4P51793 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.22■□□□□ 0.19
CLCN4P51793 AL139094.1-201ENST00000405549 1188 ntBASIC16.22■□□□□ 0.19
CLCN4P51793 FNTAP2-201ENST00000430308 634 ntBASIC16.22■□□□□ 0.19
CLCN4P51793 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN4P51793 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN4P51793 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.22■□□□□ 0.19
CLCN4P51793 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN4P51793 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN4P51793 ENPP7P14-201ENST00000621765 1040 ntBASIC16.22■□□□□ 0.19
CLCN4P51793 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN4P51793 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 AL023775.1-201ENST00000454907 1746 ntBASIC16.22■□□□□ 0.19
CLCN4P51793 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN4P51793 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN4P51793 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCN4P51793 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCN4P51793 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 AL603832.2-201ENST00000566195 2125 ntBASIC16.21■□□□□ 0.19
CLCN4P51793 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLCN4P51793 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCN4P51793 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 POM121L10P-201ENST00000436994 1285 ntBASIC16.21■□□□□ 0.19
CLCN4P51793 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCN4P51793 HSPB1P2-201ENST00000448722 546 ntBASIC16.21■□□□□ 0.19
CLCN4P51793 AC005077.2-201ENST00000449786 690 ntBASIC16.21■□□□□ 0.19
CLCN4P51793 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLCN4P51793 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCN4P51793 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.21■□□□□ 0.19
CLCN4P51793 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCN4P51793 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCN4P51793 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN4P51793 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CLCN4P51793 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.21■□□□□ 0.18
CLCN4P51793 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN4P51793 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CLCN4P51793 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCN4P51793 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 AL365203.3-201ENST00000609742 2057 ntBASIC16.2■□□□□ 0.18
CLCN4P51793 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLCN4P51793 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN4P51793 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 AL645937.2-201ENST00000396808 931 ntBASIC16.2■□□□□ 0.18
CLCN4P51793 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN4P51793 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCN4P51793 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCN4P51793 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLCN4P51793 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.2■□□□□ 0.18
CLCN4P51793 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCN4P51793 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCN4P51793 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms