Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCA2P51587 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.92■□□□□ 0.3
BRCA2P51587 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCA2P51587 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCA2P51587 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCA2P51587 CR383656.3-201ENST00000551315 183 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 AL136295.7-201ENST00000619226 1200 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 AC002472.4-201ENST00000641915 272 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.91■□□□□ 0.3
BRCA2P51587 MRPL22P1-201ENST00000505398 616 ntBASIC16.91■□□□□ 0.3
BRCA2P51587 AC011247.3-201ENST00000603297 438 ntBASIC16.91■□□□□ 0.3
BRCA2P51587 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BRCA2P51587 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCA2P51587 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCA2P51587 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 AC239868.1-201ENST00000369385 493 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.9■□□□□ 0.3
BRCA2P51587 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.9■□□□□ 0.3
BRCA2P51587 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 SHC1P1-201ENST00000425230 1745 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.9■□□□□ 0.3
BRCA2P51587 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
BRCA2P51587 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 AC084781.1-201ENST00000613737 656 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
BRCA2P51587 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 FAM90A7P-201ENST00000382628 1395 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 AL357373.1-201ENST00000394974 322 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 FAM90A23P-201ENST00000400136 1395 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 AL627422.1-201ENST00000434104 580 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.9■□□□□ 0.3
BRCA2P51587 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 AC024293.1-201ENST00000467930 498 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.9■□□□□ 0.3
BRCA2P51587 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRCA2P51587 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
BRCA2P51587 AL157813.1-201ENST00000612996 587 ntBASIC16.9■□□□□ 0.3
BRCA2P51587 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms