Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 AL589702.1-201ENST00000641229 1509 ntBASIC13.87□□□□□ -0.19
SRP9P49458 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 HLA-H-201ENST00000383620 1096 ntBASIC13.87□□□□□ -0.19
SRP9P49458 AC142381.1-201ENST00000426099 345 ntBASIC13.87□□□□□ -0.19
SRP9P49458 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.87□□□□□ -0.19
SRP9P49458 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SRP9P49458 SLC25A39P2-201ENST00000537614 270 ntBASIC13.87□□□□□ -0.19
SRP9P49458 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.87□□□□□ -0.19
SRP9P49458 AP001160.2-201ENST00000596071 487 ntBASIC13.87□□□□□ -0.19
SRP9P49458 AC009093.7-201ENST00000623853 1223 ntBASIC13.87□□□□□ -0.19
SRP9P49458 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.87□□□□□ -0.19
SRP9P49458 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 AJ011931.1-201ENST00000618749 2492 ntBASIC13.87□□□□□ -0.19
SRP9P49458 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SRP9P49458 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.86□□□□□ -0.19
SRP9P49458 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.86□□□□□ -0.19
SRP9P49458 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SRP9P49458 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.86□□□□□ -0.19
SRP9P49458 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.86□□□□□ -0.19
SRP9P49458 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.86□□□□□ -0.19
SRP9P49458 RNA5SP410-201ENST00000516285 106 ntBASIC13.86□□□□□ -0.19
SRP9P49458 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.86□□□□□ -0.19
SRP9P49458 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.86□□□□□ -0.19
SRP9P49458 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SRP9P49458 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.86□□□□□ -0.19
SRP9P49458 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.86□□□□□ -0.19
SRP9P49458 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SRP9P49458 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 ST20-AS1-201ENST00000560255 4223 ntBASIC13.86□□□□□ -0.19
SRP9P49458 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.86□□□□□ -0.19
SRP9P49458 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRP9P49458 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms