Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 AC006486.2-201ENST00000624246 2199 ntBASIC14.19□□□□□ -0.14
CENPAP49450 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CENPAP49450 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CENPAP49450 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
CENPAP49450 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 CR383656.2-201ENST00000548656 2254 ntBASIC14.18□□□□□ -0.14
CENPAP49450 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 AC090616.6-203ENST00000579186 1945 ntBASIC14.18□□□□□ -0.14
CENPAP49450 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CENPAP49450 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 ACTG1P14-201ENST00000446382 1122 ntBASIC14.18□□□□□ -0.14
CENPAP49450 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.18□□□□□ -0.14
CENPAP49450 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 AL109954.1-202ENST00000564051 2148 ntBASIC14.18□□□□□ -0.14
CENPAP49450 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.18□□□□□ -0.14
CENPAP49450 AL136982.4-201ENST00000437689 1740 ntBASIC14.18□□□□□ -0.14
CENPAP49450 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.18□□□□□ -0.14
CENPAP49450 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CENPAP49450 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 AC099063.4-201ENST00000641099 1602 ntBASIC14.17□□□□□ -0.14
CENPAP49450 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 ALG1L5P-201ENST00000482043 771 ntBASIC14.17□□□□□ -0.14
CENPAP49450 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.17□□□□□ -0.14
CENPAP49450 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.17□□□□□ -0.14
CENPAP49450 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms