Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.95■□□□□ 0.3
HTTP42858 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HTTP42858 AL627230.2-201ENST00000613254 655 ntBASIC16.95■□□□□ 0.3
HTTP42858 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.95■□□□□ 0.3
HTTP42858 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.95■□□□□ 0.3
HTTP42858 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTTP42858 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.94■□□□□ 0.3
HTTP42858 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
HTTP42858 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HTTP42858 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.94■□□□□ 0.3
HTTP42858 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.94■□□□□ 0.3
HTTP42858 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.94■□□□□ 0.3
HTTP42858 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HTTP42858 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HTTP42858 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.94■□□□□ 0.3
HTTP42858 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.94■□□□□ 0.3
HTTP42858 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HTTP42858 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.94■□□□□ 0.3
HTTP42858 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.94■□□□□ 0.3
HTTP42858 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.94■□□□□ 0.3
HTTP42858 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.94■□□□□ 0.3
HTTP42858 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTTP42858 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HTTP42858 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 AP000911.2-201ENST00000534330 502 ntBASIC16.93■□□□□ 0.3
HTTP42858 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.93■□□□□ 0.3
HTTP42858 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTTP42858 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.93■□□□□ 0.3
HTTP42858 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.93■□□□□ 0.3
HTTP42858 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 AL137783.1-201ENST00000623494 1896 ntBASIC16.93■□□□□ 0.3
HTTP42858 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HTTP42858 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.93■□□□□ 0.3
HTTP42858 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HTTP42858 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 AC004522.1-201ENST00000419978 654 ntBASIC16.92■□□□□ 0.3
HTTP42858 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.92■□□□□ 0.3
HTTP42858 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.92■□□□□ 0.3
HTTP42858 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HTTP42858 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.92■□□□□ 0.3
HTTP42858 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.92■□□□□ 0.3
HTTP42858 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.92■□□□□ 0.3
HTTP42858 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 AC084364.1-201ENST00000551967 1556 ntBASIC16.92■□□□□ 0.3
HTTP42858 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms