Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 RPL5P21-201ENST00000404620 815 ntBASIC15.76■□□□□ 0.11
HADHAP40939 AC055876.3-201ENST00000431496 288 ntBASIC15.76■□□□□ 0.11
HADHAP40939 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.76■□□□□ 0.11
HADHAP40939 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.76■□□□□ 0.11
HADHAP40939 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.76■□□□□ 0.11
HADHAP40939 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.76■□□□□ 0.11
HADHAP40939 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 AC138649.4-201ENST00000612222 287 ntBASIC15.76■□□□□ 0.11
HADHAP40939 AC093512.1-201ENST00000617969 520 ntBASIC15.76■□□□□ 0.11
HADHAP40939 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.76■□□□□ 0.11
HADHAP40939 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.76■□□□□ 0.11
HADHAP40939 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HADHAP40939 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.75■□□□□ 0.11
HADHAP40939 AC009090.5-201ENST00000624886 2285 ntBASIC15.75■□□□□ 0.11
HADHAP40939 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.75■□□□□ 0.11
HADHAP40939 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.75■□□□□ 0.11
HADHAP40939 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.75■□□□□ 0.11
HADHAP40939 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.75■□□□□ 0.11
HADHAP40939 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.75■□□□□ 0.11
HADHAP40939 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 SLED1-202ENST00000512051 380 ntBASIC15.75■□□□□ 0.11
HADHAP40939 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.75■□□□□ 0.11
HADHAP40939 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.75■□□□□ 0.11
HADHAP40939 AC011467.4-201ENST00000594891 528 ntBASIC15.75■□□□□ 0.11
HADHAP40939 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.75■□□□□ 0.11
HADHAP40939 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HADHAP40939 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.75■□□□□ 0.11
HADHAP40939 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HADHAP40939 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.74■□□□□ 0.11
HADHAP40939 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms