Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AC055811.4-201ENST00000624039 1754 ntBASIC19.55■□□□□ 0.72
ATP6V1AP38606 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AC012618.1-201ENST00000461223 412 ntBASIC19.55■□□□□ 0.72
ATP6V1AP38606 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 BNIP3P13-201ENST00000599968 566 ntBASIC19.55■□□□□ 0.72
ATP6V1AP38606 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AL353726.2-201ENST00000623259 884 ntBASIC19.55■□□□□ 0.72
ATP6V1AP38606 AC100757.4-201ENST00000626934 759 ntBASIC19.55■□□□□ 0.72
ATP6V1AP38606 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP6V1AP38606 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP6V1AP38606 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 PRKXP1-201ENST00000561423 1122 ntBASIC19.54■□□□□ 0.72
ATP6V1AP38606 AC013355.1-201ENST00000562625 723 ntBASIC19.54■□□□□ 0.72
ATP6V1AP38606 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 MIR7845-201ENST00000618396 99 ntBASIC19.54■□□□□ 0.72
ATP6V1AP38606 AL603764.1-201ENST00000636452 321 ntBASIC19.54■□□□□ 0.72
ATP6V1AP38606 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP6V1AP38606 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
ATP6V1AP38606 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 AC104073.2-201ENST00000453737 312 ntBASIC19.53■□□□□ 0.72
ATP6V1AP38606 AC106794.1-201ENST00000506935 792 ntBASIC19.53■□□□□ 0.72
ATP6V1AP38606 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 AC004923.1-202ENST00000642106 209 ntBASIC19.53■□□□□ 0.72
ATP6V1AP38606 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V1AP38606 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V1AP38606 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms