Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCK1P35558 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCK1P35558 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCK1P35558 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCK1P35558 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCK1P35558 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCK1P35558 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.43■□□□□ 0.22
PCK1P35558 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 C18orf15-201ENST00000623680 2534 ntBASIC16.42■□□□□ 0.22
PCK1P35558 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 AC074338.1-201ENST00000416825 156 ntBASIC16.42■□□□□ 0.22
PCK1P35558 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.42■□□□□ 0.22
PCK1P35558 AC125807.1-201ENST00000483097 614 ntBASIC16.42■□□□□ 0.22
PCK1P35558 AC067863.1-201ENST00000494933 530 ntBASIC16.42■□□□□ 0.22
PCK1P35558 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.42■□□□□ 0.22
PCK1P35558 AC140878.1-201ENST00000565277 250 ntBASIC16.42■□□□□ 0.22
PCK1P35558 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.42■□□□□ 0.22
PCK1P35558 AC025048.3-201ENST00000590609 569 ntBASIC16.42■□□□□ 0.22
PCK1P35558 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 AC005702.4-201ENST00000618393 416 ntBASIC16.42■□□□□ 0.22
PCK1P35558 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.42■□□□□ 0.22
PCK1P35558 AC073592.8-201ENST00000624126 511 ntBASIC16.42■□□□□ 0.22
PCK1P35558 MYO15B-237ENST00000642007 4893 ntBASIC16.42■□□□□ 0.22
PCK1P35558 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCK1P35558 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCK1P35558 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
PCK1P35558 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.41■□□□□ 0.22
PCK1P35558 AC069120.2-201ENST00000524091 540 ntBASIC16.41■□□□□ 0.22
PCK1P35558 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.41■□□□□ 0.22
PCK1P35558 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 AC139530.3-201ENST00000620344 690 ntBASIC16.41■□□□□ 0.22
PCK1P35558 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCK1P35558 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms