Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CTNNA1P35221 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.46■□□□□ 0.23
CTNNA1P35221 SPDYE17-201ENST00000412399 783 ntBASIC16.46■□□□□ 0.23
CTNNA1P35221 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CTNNA1P35221 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.46■□□□□ 0.23
CTNNA1P35221 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CTNNA1P35221 POLD2P1-201ENST00000511220 997 ntBASIC16.46■□□□□ 0.23
CTNNA1P35221 ALG1L8P-201ENST00000533887 760 ntBASIC16.46■□□□□ 0.23
CTNNA1P35221 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.46■□□□□ 0.23
CTNNA1P35221 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.46■□□□□ 0.23
CTNNA1P35221 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTNNA1P35221 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTNNA1P35221 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CTNNA1P35221 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.46■□□□□ 0.22
CTNNA1P35221 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 FGD5P1-202ENST00000614866 2498 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 AC005912.2-201ENST00000619492 2400 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 RPL5P21-201ENST00000404620 815 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 FO393414.2-201ENST00000405153 598 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.45■□□□□ 0.22
CTNNA1P35221 AC018529.1-201ENST00000613063 361 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 MROH4P-201ENST00000431302 1578 ntBASIC16.45■□□□□ 0.22
CTNNA1P35221 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.45■□□□□ 0.22
CTNNA1P35221 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTNNA1P35221 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.45■□□□□ 0.22
CTNNA1P35221 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.45■□□□□ 0.22
CTNNA1P35221 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTNNA1P35221 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTNNA1P35221 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms