Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNGA1P29973 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CNGA1P29973 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.66■□□□□ 0.42
CNGA1P29973 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 PCDHA1-201ENST00000378133 2726 ntBASIC17.65■□□□□ 0.42
CNGA1P29973 LINC02199-201ENST00000506655 2702 ntBASIC17.65■□□□□ 0.42
CNGA1P29973 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CNGA1P29973 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CNGA1P29973 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.65■□□□□ 0.42
CNGA1P29973 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CNGA1P29973 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.65■□□□□ 0.42
CNGA1P29973 KRT18P25-201ENST00000508931 1278 ntBASIC17.65■□□□□ 0.42
CNGA1P29973 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CNGA1P29973 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.65■□□□□ 0.42
CNGA1P29973 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 AHCYP2-201ENST00000430630 1300 ntBASIC17.65■□□□□ 0.42
CNGA1P29973 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNGA1P29973 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
CNGA1P29973 AL603832.2-201ENST00000566195 2125 ntBASIC17.65■□□□□ 0.42
CNGA1P29973 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.64■□□□□ 0.42
CNGA1P29973 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNGA1P29973 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNGA1P29973 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CNGA1P29973 AC024909.3-201ENST00000611513 2257 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 AC006001.1-201ENST00000325130 474 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CNGA1P29973 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CNGA1P29973 MIR1202-201ENST00000408529 83 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 RNA5SP423-201ENST00000517127 109 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.64■□□□□ 0.41
CNGA1P29973 ACTG1P17-201ENST00000558391 1119 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 RN7SL190P-201ENST00000582519 257 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 AC145423.3-201ENST00000615987 467 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 AL008638.5-201ENST00000623814 1298 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.64■□□□□ 0.41
CNGA1P29973 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
CNGA1P29973 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNGA1P29973 FLJ16779-201ENST00000612722 7638 ntBASIC17.64■□□□□ 0.41
CNGA1P29973 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.64■□□□□ 0.41
CNGA1P29973 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms