Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AL391069.4-201ENST00000609583 481 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 AC148477.4-201ENST00000613430 1793 ntBASIC15.69■□□□□ 0.1
HLA-DPA1P20036 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AL589987.1-201ENST00000453380 819 ntBASIC15.68■□□□□ 0.1
HLA-DPA1P20036 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 SPCS2P1-201ENST00000561636 679 ntBASIC15.68■□□□□ 0.1
HLA-DPA1P20036 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AC025181.2-201ENST00000606994 802 ntBASIC15.68■□□□□ 0.1
HLA-DPA1P20036 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AL645728.2-202ENST00000641679 227 ntBASIC15.68■□□□□ 0.1
HLA-DPA1P20036 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DPA1P20036 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms