Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AC068587.3-201ENST00000526613 355 ntBASIC17.42■□□□□ 0.38
ACTN1P12814 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.42■□□□□ 0.38
ACTN1P12814 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ACTN1P12814 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ACTN1P12814 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.42■□□□□ 0.38
ACTN1P12814 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN1P12814 AL596257.1-201ENST00000641463 2694 ntBASIC17.42■□□□□ 0.38
ACTN1P12814 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN1P12814 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ACTN1P12814 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ACTN1P12814 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 AC011477.6-201ENST00000604980 1927 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.41■□□□□ 0.38
ACTN1P12814 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ACTN1P12814 SOCS2P1-201ENST00000417727 557 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN1P12814 AC134915.1-201ENST00000426461 574 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN1P12814 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.41■□□□□ 0.38
ACTN1P12814 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.41■□□□□ 0.38
ACTN1P12814 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.41■□□□□ 0.38
ACTN1P12814 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 AC079316.1-201ENST00000548397 411 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 AL359711.2-201ENST00000563105 872 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 BRI3BPP1-201ENST00000594224 787 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN1P12814 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.41■□□□□ 0.38
ACTN1P12814 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.41■□□□□ 0.38
ACTN1P12814 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN1P12814 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ACTN1P12814 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ACTN1P12814 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN1P12814 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ACTN1P12814 PPT1-215ENST00000641471 2368 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 AC126177.1-201ENST00000547829 2218 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ACTN1P12814 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN1P12814 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN1P12814 AP001282.1-201ENST00000531301 1499 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 AC136621.1-201ENST00000624017 2304 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN1P12814 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 AC004987.2-201ENST00000395959 1148 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN1P12814 YBX1P6-201ENST00000442962 1002 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
ACTN1P12814 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN1P12814 AC099548.2-209ENST00000480264 625 ntBASIC17.4■□□□□ 0.38
ACTN1P12814 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN1P12814 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN1P12814 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN1P12814 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN1P12814 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN1P12814 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms