Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WNT1P04628 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.16■□□□□ 0.02
WNT1P04628 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.16■□□□□ 0.02
WNT1P04628 AP001258.2-201ENST00000529891 490 ntBASIC15.16■□□□□ 0.02
WNT1P04628 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
WNT1P04628 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.16■□□□□ 0.02
WNT1P04628 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.16■□□□□ 0.02
WNT1P04628 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
WNT1P04628 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
WNT1P04628 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 AC007950.2-201ENST00000615045 2347 ntBASIC15.15■□□□□ 0.02
WNT1P04628 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.15■□□□□ 0.02
WNT1P04628 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 MTX1P1-201ENST00000440904 838 ntBASIC15.15■□□□□ 0.02
WNT1P04628 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.15■□□□□ 0.02
WNT1P04628 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.15■□□□□ 0.02
WNT1P04628 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 RN7SL48P-201ENST00000579283 293 ntBASIC15.15■□□□□ 0.02
WNT1P04628 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.15■□□□□ 0.02
WNT1P04628 EEF1DP1-201ENST00000585891 896 ntBASIC15.15■□□□□ 0.02
WNT1P04628 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.15■□□□□ 0.02
WNT1P04628 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
WNT1P04628 AC007787.1-201ENST00000588095 1583 ntBASIC15.15■□□□□ 0.02
WNT1P04628 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
WNT1P04628 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
WNT1P04628 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT1P04628 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
WNT1P04628 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
WNT1P04628 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.14■□□□□ 0.01
WNT1P04628 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
WNT1P04628 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT1P04628 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.14■□□□□ 0.01
WNT1P04628 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.14■□□□□ 0.01
WNT1P04628 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.14■□□□□ 0.01
WNT1P04628 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms