Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.74□□□□□ -0.05
MT-ND1P03886 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
MT-ND1P03886 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.74□□□□□ -0.05
MT-ND1P03886 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 IL9RP2-201ENST00000423948 1312 ntBASIC14.73□□□□□ -0.05
MT-ND1P03886 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 CICP11-201ENST00000434745 2827 ntBASIC14.73□□□□□ -0.05
MT-ND1P03886 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MT-ND1P03886 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.73□□□□□ -0.05
MT-ND1P03886 PDPK2P-202ENST00000562415 1191 ntBASIC14.73□□□□□ -0.05
MT-ND1P03886 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.73□□□□□ -0.05
MT-ND1P03886 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
MT-ND1P03886 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MT-ND1P03886 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.73□□□□□ -0.05
MT-ND1P03886 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MT-ND1P03886 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MT-ND1P03886 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.72□□□□□ -0.05
MT-ND1P03886 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.72□□□□□ -0.05
MT-ND1P03886 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 AC002056.1-201ENST00000395613 760 ntBASIC14.72□□□□□ -0.05
MT-ND1P03886 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.72□□□□□ -0.05
MT-ND1P03886 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.72□□□□□ -0.05
MT-ND1P03886 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MT-ND1P03886 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.72□□□□□ -0.05
MT-ND1P03886 AC006504.5-208ENST00000588784 2401 ntBASIC14.72□□□□□ -0.05
MT-ND1P03886 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms