Protein–RNA interactions for Protein: O95754

SEMA4F, Semaphorin-4F, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4FO95754 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SEMA4FO95754 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.26■□□□□ 0.03
SEMA4FO95754 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEMA4FO95754 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEMA4FO95754 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SEMA4FO95754 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.26■□□□□ 0.03
SEMA4FO95754 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.25■□□□□ 0.03
SEMA4FO95754 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SEMA4FO95754 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.25■□□□□ 0.03
SEMA4FO95754 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEMA4FO95754 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SEMA4FO95754 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SEMA4FO95754 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SEMA4FO95754 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.24■□□□□ 0.03
SEMA4FO95754 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 FAM8A4P-201ENST00000435433 1213 ntBASIC15.24■□□□□ 0.03
SEMA4FO95754 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.24■□□□□ 0.03
SEMA4FO95754 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.24■□□□□ 0.03
SEMA4FO95754 AC084346.2-201ENST00000607097 949 ntBASIC15.24■□□□□ 0.03
SEMA4FO95754 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 NFIC-211ENST00000641145 8399 ntBASIC15.24■□□□□ 0.03
SEMA4FO95754 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.24■□□□□ 0.03
SEMA4FO95754 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.24■□□□□ 0.03
SEMA4FO95754 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEMA4FO95754 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms