Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.75□□□□□ -0.21
KDM4BO94953 AL591424.1-201ENST00000442569 1213 ntBASIC13.75□□□□□ -0.21
KDM4BO94953 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.75□□□□□ -0.21
KDM4BO94953 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
KDM4BO94953 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.75□□□□□ -0.21
KDM4BO94953 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 AL731571.1-201ENST00000617058 5428 ntBASIC13.75□□□□□ -0.21
KDM4BO94953 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
KDM4BO94953 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.75□□□□□ -0.21
KDM4BO94953 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.74□□□□□ -0.21
KDM4BO94953 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.74□□□□□ -0.21
KDM4BO94953 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.74□□□□□ -0.21
KDM4BO94953 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 AL590627.1-203ENST00000421194 1026 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 FDX1P1-201ENST00000449115 551 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.74□□□□□ -0.21
KDM4BO94953 RNA5SP416-201ENST00000516838 111 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.74□□□□□ -0.21
KDM4BO94953 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.74□□□□□ -0.21
KDM4BO94953 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.74□□□□□ -0.21
KDM4BO94953 AC099522.2-201ENST00000607001 744 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 BX640515.1-201ENST00000617215 977 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 AL513190.1-201ENST00000621254 727 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.74□□□□□ -0.21
KDM4BO94953 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
KDM4BO94953 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDM4BO94953 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.74□□□□□ -0.21
KDM4BO94953 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
KDM4BO94953 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KDM4BO94953 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms