Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.56□□□□□ -0.24
UPK1BO75841 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK1BO75841 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UPK1BO75841 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.55□□□□□ -0.24
UPK1BO75841 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.55□□□□□ -0.24
UPK1BO75841 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 TSPY7P-201ENST00000431358 1114 ntBASIC13.55□□□□□ -0.24
UPK1BO75841 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.55□□□□□ -0.24
UPK1BO75841 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.55□□□□□ -0.24
UPK1BO75841 AC091076.1-201ENST00000610741 619 ntBASIC13.55□□□□□ -0.24
UPK1BO75841 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK1BO75841 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 KRT8P22-201ENST00000562317 1415 ntBASIC13.55□□□□□ -0.24
UPK1BO75841 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK1BO75841 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK1BO75841 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
UPK1BO75841 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 AC073869.1-201ENST00000415574 2762 ntBASIC13.54□□□□□ -0.24
UPK1BO75841 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 KRT18P6-201ENST00000555540 1265 ntBASIC13.54□□□□□ -0.24
UPK1BO75841 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.54□□□□□ -0.24
UPK1BO75841 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK1BO75841 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK1BO75841 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK1BO75841 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms