Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH4O75427 AL512638.1-201ENST00000457493 794 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH4O75427 CYMP-203ENST00000474680 1263 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRCH4O75427 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 AJ011931.1-201ENST00000618749 2492 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH4O75427 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 FER1L4-210ENST00000615531 5998 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 REXO1L2P-201ENST00000425429 2069 ntBASIC16.14■□□□□ 0.17
LRCH4O75427 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH4O75427 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
LRCH4O75427 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH4O75427 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 AL359258.3-201ENST00000622910 2331 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRCH4O75427 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH4O75427 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH4O75427 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH4O75427 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 AC011467.4-201ENST00000594891 528 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 LINC02084-201ENST00000606069 1096 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
LRCH4O75427 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH4O75427 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 ACE3P-201ENST00000423435 1973 ntBASIC16.13■□□□□ 0.17
LRCH4O75427 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH4O75427 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH4O75427 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH4O75427 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH4O75427 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH4O75427 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRCH4O75427 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH4O75427 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.12■□□□□ 0.17
LRCH4O75427 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH4O75427 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRCH4O75427 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH4O75427 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRCH4O75427 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms