Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 AC009407.1-201ENST00000568958 598 ntBASIC14.6□□□□□ -0.07
HCN1O60741 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.6□□□□□ -0.07
HCN1O60741 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 AC004233.3-201ENST00000607794 1269 ntBASIC14.6□□□□□ -0.07
HCN1O60741 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.6□□□□□ -0.07
HCN1O60741 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.6□□□□□ -0.07
HCN1O60741 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.6□□□□□ -0.07
HCN1O60741 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.6□□□□□ -0.07
HCN1O60741 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HCN1O60741 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HCN1O60741 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.6□□□□□ -0.07
HCN1O60741 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.59□□□□□ -0.07
HCN1O60741 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HCN1O60741 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.59□□□□□ -0.07
HCN1O60741 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HCN1O60741 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HCN1O60741 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.58□□□□□ -0.07
HCN1O60741 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HCN1O60741 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HCN1O60741 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HCN1O60741 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HCN1O60741 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HCN1O60741 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HCN1O60741 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 AC015922.1-201ENST00000421102 1152 ntBASIC14.58□□□□□ -0.08
HCN1O60741 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HCN1O60741 MIR6069-201ENST00000620069 79 ntBASIC14.58□□□□□ -0.08
HCN1O60741 AL358472.5-202ENST00000641448 1267 ntBASIC14.58□□□□□ -0.08
HCN1O60741 AF228730.6-201ENST00000641497 218 ntBASIC14.58□□□□□ -0.08
HCN1O60741 AC084121.3-201ENST00000641716 218 ntBASIC14.58□□□□□ -0.08
HCN1O60741 AC105233.6-201ENST00000642093 218 ntBASIC14.58□□□□□ -0.08
HCN1O60741 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.58□□□□□ -0.08
HCN1O60741 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HCN1O60741 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HCN1O60741 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.57□□□□□ -0.08
HCN1O60741 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCN1O60741 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HCN1O60741 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
HCN1O60741 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HCN1O60741 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HCN1O60741 AC006486.2-201ENST00000624246 2199 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms