Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 CLUHP6-201ENST00000580789 941 ntBASIC15.43■□□□□ 0.06
PCDHGA12O60330 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA12O60330 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA12O60330 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 BCYRN1-201ENST00000418539 200 ntBASIC15.42■□□□□ 0.06
PCDHGA12O60330 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGA12O60330 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGA12O60330 AC134312.5-201ENST00000568031 1313 ntBASIC15.42■□□□□ 0.06
PCDHGA12O60330 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 FTH1P14-201ENST00000482930 551 ntBASIC15.41■□□□□ 0.06
PCDHGA12O60330 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AC108725.1-201ENST00000495472 409 ntBASIC15.41■□□□□ 0.06
PCDHGA12O60330 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AC244093.1-201ENST00000610837 814 ntBASIC15.41■□□□□ 0.06
PCDHGA12O60330 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGA12O60330 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA12O60330 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms