Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.8■□□□□ 0.12
RIPK2O43353 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 BEND3P1-201ENST00000421591 1944 ntBASIC15.8■□□□□ 0.12
RIPK2O43353 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIPK2O43353 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 AC018442.1-201ENST00000421439 2061 ntBASIC15.79■□□□□ 0.12
RIPK2O43353 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 MRPL3P1-201ENST00000400109 1033 ntBASIC15.79■□□□□ 0.12
RIPK2O43353 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.79■□□□□ 0.12
RIPK2O43353 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RIPK2O43353 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 AP000842.3-202ENST00000569238 1080 ntBASIC15.79■□□□□ 0.12
RIPK2O43353 AP001005.1-201ENST00000571755 1248 ntBASIC15.79■□□□□ 0.12
RIPK2O43353 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RIPK2O43353 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.79■□□□□ 0.12
RIPK2O43353 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RIPK2O43353 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 AL671277.1-201ENST00000429656 993 ntBASIC15.78■□□□□ 0.12
RIPK2O43353 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.78■□□□□ 0.12
RIPK2O43353 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.78■□□□□ 0.12
RIPK2O43353 AC034105.1-201ENST00000563488 319 ntBASIC15.78■□□□□ 0.12
RIPK2O43353 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.78■□□□□ 0.12
RIPK2O43353 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.78■□□□□ 0.12
RIPK2O43353 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RIPK2O43353 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RIPK2O43353 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms