Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 AC092933.1-201ENST00000393644 945 ntBASIC16.06■□□□□ 0.16
SCAMP3O14828 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.06■□□□□ 0.16
SCAMP3O14828 AC012441.1-201ENST00000446669 685 ntBASIC16.06■□□□□ 0.16
SCAMP3O14828 AC007551.1-201ENST00000457394 519 ntBASIC16.06■□□□□ 0.16
SCAMP3O14828 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.06■□□□□ 0.16
SCAMP3O14828 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAMP3O14828 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.06■□□□□ 0.16
SCAMP3O14828 AP001063.1-201ENST00000568332 529 ntBASIC16.06■□□□□ 0.16
SCAMP3O14828 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.06■□□□□ 0.16
SCAMP3O14828 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.06■□□□□ 0.16
SCAMP3O14828 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCAMP3O14828 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAMP3O14828 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAMP3O14828 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.06■□□□□ 0.16
SCAMP3O14828 AC026691.1-201ENST00000602502 2017 ntBASIC16.06■□□□□ 0.16
SCAMP3O14828 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SCAMP3O14828 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP3O14828 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 AC005229.1-201ENST00000392885 409 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 BOLA2P3-201ENST00000404566 256 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP3O14828 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP3O14828 AC009486.1-201ENST00000569860 813 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP3O14828 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP3O14828 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP3O14828 AC025181.2-201ENST00000606994 802 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SCAMP3O14828 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 MIR6799-201ENST00000620297 69 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP3O14828 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SCAMP3O14828 AC127383.1-201ENST00000444697 1800 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 NFIC-211ENST00000641145 8399 ntBASIC16.05■□□□□ 0.16
SCAMP3O14828 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP3O14828 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP3O14828 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.04■□□□□ 0.16
SCAMP3O14828 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.04■□□□□ 0.16
SCAMP3O14828 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP3O14828 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP3O14828 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP3O14828 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP3O14828 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP3O14828 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP3O14828 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
SCAMP3O14828 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms