Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CES1P1-201ENST00000421606 1704 ntBASIC10.94□□□□□ -0.66
LINC01546A6NGU7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01546A6NGU7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 OR2I1P-209ENST00000641730 5365 ntBASIC10.93□□□□□ -0.66
LINC01546A6NGU7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC140658.5-201ENST00000438532 169 ntBASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AL139010.1-201ENST00000454878 894 ntBASIC10.93□□□□□ -0.66
LINC01546A6NGU7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 MIR1199-201ENST00000621445 119 ntBASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC020910.6-201ENST00000623084 1459 ntBASIC10.93□□□□□ -0.66
LINC01546A6NGU7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01546A6NGU7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 LILRP1-201ENST00000444199 1370 ntBASIC10.92□□□□□ -0.66
LINC01546A6NGU7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AC114271.1-201ENST00000612689 2813 ntBASIC10.92□□□□□ -0.66
LINC01546A6NGU7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms