Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 Z83851.2-201ENST00000609564 659 ntBASIC16.95■□□□□ 0.3
CCDC66A2RUB6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC66A2RUB6 HLA-A-201ENST00000376802 1334 ntBASIC16.95■□□□□ 0.3
CCDC66A2RUB6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 WASH6P-202ENST00000359512 1437 ntBASIC16.94■□□□□ 0.3
CCDC66A2RUB6 AC025580.3-201ENST00000617932 1424 ntBASIC16.94■□□□□ 0.3
CCDC66A2RUB6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC66A2RUB6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 PRYP6-201ENST00000514804 343 ntBASIC16.93■□□□□ 0.3
CCDC66A2RUB6 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms