Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 KRT18P58-201ENST00000527480 1120 ntBASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AC018529.1-201ENST00000613063 361 ntBASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 AL390755.1-201ENST00000623716 2027 ntBASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00959A0A1B0GUT2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 AJ011931.1-201ENST00000618749 2492 ntBASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00959A0A1B0GUT2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms