Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TNFRSF11AQ9Y6Q6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TNFRSF11AQ9Y6Q6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TNFRSF11AQ9Y6Q6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.65■■■□□ 2.18
TNFRSF11AQ9Y6Q6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.65■■■□□ 2.18
TNFRSF11AQ9Y6Q6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TNFRSF11AQ9Y6Q6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.64■■■□□ 2.18
TNFRSF11AQ9Y6Q6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TNFRSF11AQ9Y6Q6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.64■■■□□ 2.18
TNFRSF11AQ9Y6Q6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.64■■■□□ 2.18
TNFRSF11AQ9Y6Q6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.64■■■□□ 2.17
TNFRSF11AQ9Y6Q6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
TNFRSF11AQ9Y6Q6 HLA-L-211ENST00000482052 1765 ntBASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AC092028.1-203ENST00000608262 953 ntBASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AC142381.3-201ENST00000568208 1670 ntBASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TNFRSF11AQ9Y6Q6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 KRT125P-201ENST00000546827 989 ntBASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TNFRSF11AQ9Y6Q6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AL356441.2-201ENST00000443009 864 ntBASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TNFRSF11AQ9Y6Q6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 AC131274.2-201ENST00000580697 1507 ntBASIC28.58■■■□□ 2.17
TNFRSF11AQ9Y6Q6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 TSPY9P-201ENST00000440215 945 ntBASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 TSPY11P-201ENST00000442607 1045 ntBASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TNFRSF11AQ9Y6Q6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.56■■■□□ 2.16
TNFRSF11AQ9Y6Q6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 SNX5-217ENST00000606557 1087 ntBASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TNFRSF11AQ9Y6Q6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.54■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.54■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms