Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
GPC6Q9Y625 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GPC6Q9Y625 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GPC6Q9Y625 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC6Q9Y625 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC6Q9Y625 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.81■■□□□ 1.08
GPC6Q9Y625 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC6Q9Y625 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.81■■□□□ 1.08
GPC6Q9Y625 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GPC6Q9Y625 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC6Q9Y625 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC6Q9Y625 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
GPC6Q9Y625 KRT18P10-201ENST00000388836 1287 ntBASIC21.8■■□□□ 1.08
GPC6Q9Y625 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC6Q9Y625 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPC6Q9Y625 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.8■■□□□ 1.08
GPC6Q9Y625 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.8■■□□□ 1.08
GPC6Q9Y625 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPC6Q9Y625 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC6Q9Y625 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC6Q9Y625 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.79■■□□□ 1.08
GPC6Q9Y625 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC6Q9Y625 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GPC6Q9Y625 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC6Q9Y625 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
GPC6Q9Y625 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
GPC6Q9Y625 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPC6Q9Y625 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC6Q9Y625 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.78■■□□□ 1.08
GPC6Q9Y625 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GPC6Q9Y625 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GPC6Q9Y625 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
GPC6Q9Y625 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPC6Q9Y625 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.78■■□□□ 1.08
GPC6Q9Y625 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.77■■□□□ 1.08
GPC6Q9Y625 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC6Q9Y625 KRT18P60-201ENST00000312876 1297 ntBASIC21.77■■□□□ 1.08
GPC6Q9Y625 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
GPC6Q9Y625 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPC6Q9Y625 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
GPC6Q9Y625 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
GPC6Q9Y625 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GPC6Q9Y625 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC6Q9Y625 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GPC6Q9Y625 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC6Q9Y625 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC6Q9Y625 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GPC6Q9Y625 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 AC018755.3-202ENST00000596210 929 ntBASIC21.75■■□□□ 1.07
GPC6Q9Y625 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC6Q9Y625 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GPC6Q9Y625 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GPC6Q9Y625 FOXO3B-201ENST00000395675 1928 ntBASIC21.74■■□□□ 1.07
GPC6Q9Y625 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.74■■□□□ 1.07
GPC6Q9Y625 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC6Q9Y625 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC6Q9Y625 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC6Q9Y625 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC6Q9Y625 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC6Q9Y625 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
GPC6Q9Y625 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
GPC6Q9Y625 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.73■■□□□ 1.07
GPC6Q9Y625 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.73■■□□□ 1.07
GPC6Q9Y625 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.73■■□□□ 1.07
GPC6Q9Y625 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
GPC6Q9Y625 AC129492.7-201ENST00000622992 756 ntBASIC21.73■■□□□ 1.07
GPC6Q9Y625 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC6Q9Y625 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GPC6Q9Y625 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GPC6Q9Y625 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.71■■□□□ 1.07
GPC6Q9Y625 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC6Q9Y625 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.71■■□□□ 1.07
GPC6Q9Y625 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC6Q9Y625 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC6Q9Y625 DUX4L9-201ENST00000449051 1259 ntBASIC21.71■■□□□ 1.07
GPC6Q9Y625 SPCS2P3-201ENST00000500401 656 ntBASIC21.71■■□□□ 1.07
GPC6Q9Y625 MIR6765-201ENST00000614092 87 ntBASIC21.71■■□□□ 1.07
GPC6Q9Y625 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC6Q9Y625 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
GPC6Q9Y625 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.7■■□□□ 1.06
GPC6Q9Y625 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GPC6Q9Y625 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GPC6Q9Y625 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GPC6Q9Y625 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.7■■□□□ 1.06
GPC6Q9Y625 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms