Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.21■■■□□ 2.59
GTF3C3Q9Y5Q9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
GTF3C3Q9Y5Q9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
GTF3C3Q9Y5Q9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
GTF3C3Q9Y5Q9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
GTF3C3Q9Y5Q9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
GTF3C3Q9Y5Q9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.2■■■□□ 2.59
GTF3C3Q9Y5Q9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
GTF3C3Q9Y5Q9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
GTF3C3Q9Y5Q9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
GTF3C3Q9Y5Q9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
GTF3C3Q9Y5Q9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.18■■■□□ 2.58
GTF3C3Q9Y5Q9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.17■■■□□ 2.58
GTF3C3Q9Y5Q9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
GTF3C3Q9Y5Q9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC31.15■■■□□ 2.58
GTF3C3Q9Y5Q9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
GTF3C3Q9Y5Q9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
GTF3C3Q9Y5Q9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
GTF3C3Q9Y5Q9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
GTF3C3Q9Y5Q9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
GTF3C3Q9Y5Q9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
GTF3C3Q9Y5Q9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.13■■■□□ 2.57
GTF3C3Q9Y5Q9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
GTF3C3Q9Y5Q9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
GTF3C3Q9Y5Q9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
GTF3C3Q9Y5Q9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
GTF3C3Q9Y5Q9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 LINC00273-201ENST00000539813 1452 ntBASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
GTF3C3Q9Y5Q9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC31.09■■■□□ 2.57
GTF3C3Q9Y5Q9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.08■■■□□ 2.57
GTF3C3Q9Y5Q9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
GTF3C3Q9Y5Q9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.08■■■□□ 2.57
GTF3C3Q9Y5Q9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
GTF3C3Q9Y5Q9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
GTF3C3Q9Y5Q9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
GTF3C3Q9Y5Q9 AC092667.1-201ENST00000434301 2586 ntBASIC31.07■■■□□ 2.56
GTF3C3Q9Y5Q9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
GTF3C3Q9Y5Q9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
GTF3C3Q9Y5Q9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
GTF3C3Q9Y5Q9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC31.05■■■□□ 2.56
GTF3C3Q9Y5Q9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
GTF3C3Q9Y5Q9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
GTF3C3Q9Y5Q9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
GTF3C3Q9Y5Q9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms