Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA11Q9Y5H2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGA11Q9Y5H2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 AC139795.1-202ENST00000500444 432 ntBASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PCDHGA11Q9Y5H2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 HLA-L-211ENST00000482052 1765 ntBASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 AC019171.1-201ENST00000601251 1056 ntBASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA11Q9Y5H2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 AC090877.2-201ENST00000558441 1738 ntBASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 ATP5G2P3-201ENST00000429083 425 ntBASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGA11Q9Y5H2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 AC004987.1-201ENST00000428627 508 ntBASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA11Q9Y5H2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGA11Q9Y5H2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA11Q9Y5H2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHGA11Q9Y5H2 AC012676.1-201ENST00000574705 1949 ntBASIC22.39■■□□□ 1.18
PCDHGA11Q9Y5H2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA11Q9Y5H2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 TSPY13P-201ENST00000338964 914 ntBASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 AC022616.5-201ENST00000518796 181 ntBASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 BHLHE23-202ENST00000612929 1109 ntBASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 AC074183.2-201ENST00000623112 922 ntBASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA11Q9Y5H2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA11Q9Y5H2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA11Q9Y5H2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms