Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 UNC93B8-201ENST00000511903 705 ntBASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB11Q9Y5F2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 MIR935-201ENST00000401179 91 ntBASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 AC022211.4-201ENST00000625094 2161 ntBASIC22.72■■□□□ 1.23
PCDHB11Q9Y5F2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 TSPY9P-201ENST00000440215 945 ntBASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 TSPY11P-201ENST00000442607 1045 ntBASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 AC120024.1-201ENST00000562672 995 ntBASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB11Q9Y5F2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.7■■□□□ 1.23
PCDHB11Q9Y5F2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHB11Q9Y5F2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 AC137630.3-201ENST00000607245 391 ntBASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PCDHB11Q9Y5F2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHB11Q9Y5F2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHB11Q9Y5F2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHB11Q9Y5F2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHB11Q9Y5F2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB11Q9Y5F2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 AC138932.3-201ENST00000567634 1902 ntBASIC22.67■■□□□ 1.22
PCDHB11Q9Y5F2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
PCDHB11Q9Y5F2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB11Q9Y5F2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHB11Q9Y5F2 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHB11Q9Y5F2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB11Q9Y5F2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB11Q9Y5F2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 AC011551.1-201ENST00000614101 683 ntBASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB11Q9Y5F2 AC021242.3-201ENST00000607598 1377 ntBASIC22.63■■□□□ 1.21
PCDHB11Q9Y5F2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB11Q9Y5F2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB11Q9Y5F2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHB11Q9Y5F2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHB11Q9Y5F2 AC090877.2-201ENST00000558441 1738 ntBASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms