Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.52■□□□□ 0.56
LSM4Q9Y4Z0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.52■□□□□ 0.55
LSM4Q9Y4Z0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.52■□□□□ 0.55
LSM4Q9Y4Z0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSM4Q9Y4Z0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 RP9P-202ENST00000450133 1212 ntBASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 AL035685.1-201ENST00000636663 812 ntBASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.5■□□□□ 0.55
LSM4Q9Y4Z0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LSM4Q9Y4Z0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM4Q9Y4Z0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM4Q9Y4Z0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM4Q9Y4Z0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 DUX4L9-201ENST00000449051 1259 ntBASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 AL451085.2-201ENST00000605085 799 ntBASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LSM4Q9Y4Z0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM4Q9Y4Z0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 RAP2CP1-202ENST00000605179 643 ntBASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 AC074183.2-201ENST00000623112 922 ntBASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 ABCB10P4-201ENST00000566803 2184 ntBASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSM4Q9Y4Z0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LSM4Q9Y4Z0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.46■□□□□ 0.54
LSM4Q9Y4Z0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 AC093536.1-201ENST00000569153 554 ntBASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM4Q9Y4Z0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 BHLHE23-202ENST00000612929 1109 ntBASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 AC079834.2-201ENST00000609776 1949 ntBASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM4Q9Y4Z0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms