Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
TCAF1Q9Y4C2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TCAF1Q9Y4C2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.33■■□□□ 1.33
TCAF1Q9Y4C2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCAF1Q9Y4C2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCAF1Q9Y4C2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCAF1Q9Y4C2 TSPY13P-201ENST00000338964 914 ntBASIC23.33■■□□□ 1.33
TCAF1Q9Y4C2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TCAF1Q9Y4C2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TCAF1Q9Y4C2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TCAF1Q9Y4C2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.32■■□□□ 1.32
TCAF1Q9Y4C2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCAF1Q9Y4C2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCAF1Q9Y4C2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 BHLHE23-202ENST00000612929 1109 ntBASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCAF1Q9Y4C2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 AC022616.5-201ENST00000518796 181 ntBASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 AC011551.1-201ENST00000614101 683 ntBASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
TCAF1Q9Y4C2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TCAF1Q9Y4C2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 AC074183.2-201ENST00000623112 922 ntBASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 AC012354.3-201ENST00000623734 483 ntBASIC23.28■■□□□ 1.32
TCAF1Q9Y4C2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 PVT1_1.1-201ENST00000615125 194 ntBASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
TCAF1Q9Y4C2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TCAF1Q9Y4C2 ABCB10P4-201ENST00000566803 2184 ntBASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCAF1Q9Y4C2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 AC010980.1-201ENST00000587192 1142 ntBASIC23.24■■□□□ 1.31
TCAF1Q9Y4C2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms