Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPA1Q9UND3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 AC010997.5-201ENST00000609182 354 ntBASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPA1Q9UND3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 MTDHP2-201ENST00000601468 714 ntBASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NPIPA1Q9UND3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPIPA1Q9UND3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.33■■□□□ 1.01
NPIPA1Q9UND3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.33■■□□□ 1.01
NPIPA1Q9UND3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.33■■□□□ 1.01
NPIPA1Q9UND3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPIPA1Q9UND3 FOXO3B-201ENST00000395675 1928 ntBASIC21.33■■□□□ 1
NPIPA1Q9UND3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NPIPA1Q9UND3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NPIPA1Q9UND3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPA1Q9UND3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPA1Q9UND3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPIPA1Q9UND3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.32■■□□□ 1
NPIPA1Q9UND3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.32■■□□□ 1
NPIPA1Q9UND3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPA1Q9UND3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPA1Q9UND3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NPIPA1Q9UND3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPA1Q9UND3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.3■■□□□ 1
NPIPA1Q9UND3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPA1Q9UND3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
NPIPA1Q9UND3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPA1Q9UND3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPIPA1Q9UND3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.29■■□□□ 1
NPIPA1Q9UND3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPIPA1Q9UND3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPA1Q9UND3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPIPA1Q9UND3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPIPA1Q9UND3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPIPA1Q9UND3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPIPA1Q9UND3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.28■■□□□ 1
NPIPA1Q9UND3 AC142381.3-201ENST00000568208 1670 ntBASIC21.28■■□□□ 1
NPIPA1Q9UND3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NPIPA1Q9UND3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPA1Q9UND3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NPIPA1Q9UND3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.27■■□□□ 1
NPIPA1Q9UND3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPA1Q9UND3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPA1Q9UND3 MIR6724-1-201ENST00000616420 92 ntBASIC21.27■■□□□ 1
NPIPA1Q9UND3 MIR6724-2-201ENST00000616483 92 ntBASIC21.27■■□□□ 1
NPIPA1Q9UND3 MIR6724-4-201ENST00000617390 92 ntBASIC21.27■■□□□ 1
NPIPA1Q9UND3 MIR6724-3-201ENST00000622482 92 ntBASIC21.27■■□□□ 1
NPIPA1Q9UND3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPA1Q9UND3 AC022211.4-201ENST00000625094 2161 ntBASIC21.27■■□□□ 1
NPIPA1Q9UND3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPIPA1Q9UND3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms