Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 AC016575.1-201ENST00000607026 382 ntBASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C12orf4Q9NQ89 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C12orf4Q9NQ89 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 AL157400.5-201ENST00000507624 621 ntBASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C12orf4Q9NQ89 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 MIR3960-201ENST00000583311 91 ntBASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
C12orf4Q9NQ89 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 AC025884.2-201ENST00000553429 711 ntBASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C12orf4Q9NQ89 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C12orf4Q9NQ89 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C12orf4Q9NQ89 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
C12orf4Q9NQ89 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.86■□□□□ 0.77
C12orf4Q9NQ89 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms