Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MIR4281-201ENST00000580852 62 ntBASIC19.75■□□□□ 0.75
GCM1Q9NP62 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GCM1Q9NP62 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GCM1Q9NP62 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.74■□□□□ 0.75
GCM1Q9NP62 AL035685.1-201ENST00000636663 812 ntBASIC19.74■□□□□ 0.75
GCM1Q9NP62 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GCM1Q9NP62 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GCM1Q9NP62 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GCM1Q9NP62 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GCM1Q9NP62 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GCM1Q9NP62 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GCM1Q9NP62 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
GCM1Q9NP62 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GCM1Q9NP62 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GCM1Q9NP62 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GCM1Q9NP62 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
GCM1Q9NP62 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
GCM1Q9NP62 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GCM1Q9NP62 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.72■□□□□ 0.75
GCM1Q9NP62 AC142381.3-201ENST00000568208 1670 ntBASIC19.71■□□□□ 0.75
GCM1Q9NP62 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GCM1Q9NP62 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GCM1Q9NP62 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
GCM1Q9NP62 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.71■□□□□ 0.75
GCM1Q9NP62 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
GCM1Q9NP62 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GCM1Q9NP62 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GCM1Q9NP62 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GCM1Q9NP62 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
GCM1Q9NP62 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.7■□□□□ 0.74
GCM1Q9NP62 AC137630.3-201ENST00000607245 391 ntBASIC19.7■□□□□ 0.74
GCM1Q9NP62 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GCM1Q9NP62 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GCM1Q9NP62 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GCM1Q9NP62 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.7■□□□□ 0.74
GCM1Q9NP62 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GCM1Q9NP62 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCM1Q9NP62 BX664725.1-201ENST00000438252 379 ntBASIC19.68■□□□□ 0.74
GCM1Q9NP62 Z92544.1-202ENST00000571933 1220 ntBASIC19.68■□□□□ 0.74
GCM1Q9NP62 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCM1Q9NP62 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.68■□□□□ 0.74
GCM1Q9NP62 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCM1Q9NP62 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GCM1Q9NP62 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
GCM1Q9NP62 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 AC138932.3-201ENST00000567634 1902 ntBASIC19.67■□□□□ 0.74
GCM1Q9NP62 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GCM1Q9NP62 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.67■□□□□ 0.74
GCM1Q9NP62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
GCM1Q9NP62 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 AP003733.4-201ENST00000623785 1697 ntBASIC19.67■□□□□ 0.74
GCM1Q9NP62 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
GCM1Q9NP62 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCM1Q9NP62 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 AC239859.2-201ENST00000444165 318 ntBASIC19.66■□□□□ 0.74
GCM1Q9NP62 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.66■□□□□ 0.74
GCM1Q9NP62 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.66■□□□□ 0.74
GCM1Q9NP62 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GCM1Q9NP62 AF131216.4-201ENST00000638924 1588 ntBASIC19.66■□□□□ 0.74
GCM1Q9NP62 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
GCM1Q9NP62 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GCM1Q9NP62 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms