Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 DUX4L11-201ENST00000611504 1267 ntBASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 DUX4L12-201ENST00000614593 1267 ntBASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 DUX4L14-201ENST00000621227 1267 ntBASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 C9orf163-202ENST00000624034 2573 ntBASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 ABCB10P4-201ENST00000566803 2184 ntBASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SND1-IT1Q9HBX3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SND1-IT1Q9HBX3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SND1-IT1Q9HBX3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 HES6-205ENST00000409356 528 ntTSL 2 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 AC126177.7-201ENST00000547904 679 ntBASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SND1-IT1Q9HBX3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 AL117328.2-201ENST00000624617 1940 ntBASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.44■□□□□ 0.06
SND1-IT1Q9HBX3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.43■□□□□ 0.06
SND1-IT1Q9HBX3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SND1-IT1Q9HBX3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SND1-IT1Q9HBX3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SND1-IT1Q9HBX3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms