Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC40Q9H9A6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
LRRC40Q9H9A6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC40Q9H9A6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
LRRC40Q9H9A6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC40Q9H9A6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 TSPY13P-201ENST00000338964 914 ntBASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 AC022616.5-201ENST00000518796 181 ntBASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC40Q9H9A6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 BHLHE23-202ENST00000612929 1109 ntBASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 AC011551.1-201ENST00000614101 683 ntBASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC40Q9H9A6 AC004812.2-201ENST00000611079 2094 ntBASIC23.52■■□□□ 1.35
LRRC40Q9H9A6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
LRRC40Q9H9A6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 AC074183.2-201ENST00000623112 922 ntBASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC40Q9H9A6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC40Q9H9A6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC40Q9H9A6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 AC012354.3-201ENST00000623734 483 ntBASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC40Q9H9A6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC40Q9H9A6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC40Q9H9A6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC40Q9H9A6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC40Q9H9A6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LRRC40Q9H9A6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
LRRC40Q9H9A6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
LRRC40Q9H9A6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRC40Q9H9A6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
LRRC40Q9H9A6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.44■■□□□ 1.34
LRRC40Q9H9A6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms