Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
VRTNQ9H8Y1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.88■■□□□ 1.57
VRTNQ9H8Y1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VRTNQ9H8Y1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VRTNQ9H8Y1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
VRTNQ9H8Y1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.86■■□□□ 1.57
VRTNQ9H8Y1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 AC239859.2-201ENST00000444165 318 ntBASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.85■■□□□ 1.57
VRTNQ9H8Y1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VRTNQ9H8Y1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 KRT125P-201ENST00000546827 989 ntBASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VRTNQ9H8Y1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
VRTNQ9H8Y1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
VRTNQ9H8Y1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VRTNQ9H8Y1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VRTNQ9H8Y1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.82■■□□□ 1.56
VRTNQ9H8Y1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 MIR4787-201ENST00000607364 84 ntBASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 AC131274.2-201ENST00000580697 1507 ntBASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VRTNQ9H8Y1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 AL161729.1-201ENST00000604104 1402 ntBASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 AL139125.2-201ENST00000623134 1869 ntBASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
VRTNQ9H8Y1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.79■■□□□ 1.56
VRTNQ9H8Y1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VRTNQ9H8Y1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VRTNQ9H8Y1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.79■■□□□ 1.56
VRTNQ9H8Y1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.79■■□□□ 1.56
VRTNQ9H8Y1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 GUSBP5-201ENST00000418136 578 ntBASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 AC092028.1-203ENST00000608262 953 ntBASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
VRTNQ9H8Y1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
VRTNQ9H8Y1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 AC004448.1-201ENST00000458332 883 ntBASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 SNX5-217ENST00000606557 1087 ntBASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
VRTNQ9H8Y1 AL022069.1-201ENST00000568025 1636 ntBASIC24.75■■□□□ 1.55
VRTNQ9H8Y1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VRTNQ9H8Y1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms