Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
ATXN3LQ9H3M9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.45■■□□□ 1.5
ATXN3LQ9H3M9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.45■■□□□ 1.5
ATXN3LQ9H3M9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.44■■□□□ 1.5
ATXN3LQ9H3M9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATXN3LQ9H3M9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
ATXN3LQ9H3M9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATXN3LQ9H3M9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.41■■□□□ 1.5
ATXN3LQ9H3M9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
ATXN3LQ9H3M9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 SNX5-217ENST00000606557 1087 ntBASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ATXN3LQ9H3M9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATXN3LQ9H3M9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATXN3LQ9H3M9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 AL139246.5-201ENST00000606645 996 ntBASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
ATXN3LQ9H3M9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 MIR4466-201ENST00000606121 54 ntBASIC24.37■■□□□ 1.49
ATXN3LQ9H3M9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATXN3LQ9H3M9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATXN3LQ9H3M9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATXN3LQ9H3M9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 MIR638-201ENST00000385237 100 ntBASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 MIR6722-201ENST00000617286 78 ntBASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATXN3LQ9H3M9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATXN3LQ9H3M9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ATXN3LQ9H3M9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATXN3LQ9H3M9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATXN3LQ9H3M9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATXN3LQ9H3M9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
ATXN3LQ9H3M9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.32■■□□□ 1.48
ATXN3LQ9H3M9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATXN3LQ9H3M9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.32■■□□□ 1.48
ATXN3LQ9H3M9 AL512631.2-201ENST00000604634 923 ntBASIC24.32■■□□□ 1.48
ATXN3LQ9H3M9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms