Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN3Q9H347 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN3Q9H347 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.47■■□□□ 1.03
UBQLN3Q9H347 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.47■■□□□ 1.03
UBQLN3Q9H347 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 FOXO3B-201ENST00000395675 1928 ntBASIC21.46■■□□□ 1.03
UBQLN3Q9H347 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN3Q9H347 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
UBQLN3Q9H347 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 AC120024.1-201ENST00000562672 995 ntBASIC21.45■■□□□ 1.02
UBQLN3Q9H347 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN3Q9H347 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 THA1P-201ENST00000590384 1145 ntBASIC21.44■■□□□ 1.02
UBQLN3Q9H347 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN3Q9H347 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.43■■□□□ 1.02
UBQLN3Q9H347 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
UBQLN3Q9H347 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 AC011551.1-201ENST00000614101 683 ntBASIC21.41■■□□□ 1.02
UBQLN3Q9H347 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN3Q9H347 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN3Q9H347 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
UBQLN3Q9H347 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBQLN3Q9H347 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBQLN3Q9H347 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN3Q9H347 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.39■■□□□ 1.01
UBQLN3Q9H347 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.39■■□□□ 1.01
UBQLN3Q9H347 Z92544.1-202ENST00000571933 1220 ntBASIC21.39■■□□□ 1.01
UBQLN3Q9H347 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN3Q9H347 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN3Q9H347 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBQLN3Q9H347 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN3Q9H347 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN3Q9H347 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.38■■□□□ 1.01
UBQLN3Q9H347 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
UBQLN3Q9H347 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN3Q9H347 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms