Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 ERN1-208ENST00000606895 2068 ntBASIC22.19■■□□□ 1.14
STRADBQ9C0K7 EDA-201ENST00000338901 1233 ntBASIC22.19■■□□□ 1.14
STRADBQ9C0K7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 DUX4L19-201ENST00000557448 1267 ntBASIC22.19■■□□□ 1.14
STRADBQ9C0K7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
STRADBQ9C0K7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 AL355001.2-201ENST00000620617 1191 ntBASIC22.18■■□□□ 1.14
STRADBQ9C0K7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
STRADBQ9C0K7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 ZNRF2P3-201ENST00000424200 374 ntBASIC22.17■■□□□ 1.14
STRADBQ9C0K7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
STRADBQ9C0K7 AC010501.1-201ENST00000606270 1962 ntBASIC22.17■■□□□ 1.14
STRADBQ9C0K7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 AC024257.2-201ENST00000549699 147 ntBASIC22.16■■□□□ 1.14
STRADBQ9C0K7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
STRADBQ9C0K7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 SUDS3P1-201ENST00000505831 966 ntBASIC22.15■■□□□ 1.14
STRADBQ9C0K7 AC092171.4-201ENST00000609130 632 ntBASIC22.15■■□□□ 1.14
STRADBQ9C0K7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
STRADBQ9C0K7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
STRADBQ9C0K7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 RARRES2P6-201ENST00000567333 442 ntBASIC22.13■■□□□ 1.13
STRADBQ9C0K7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
STRADBQ9C0K7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 AL031432.3-201ENST00000607698 485 ntBASIC22.12■■□□□ 1.13
STRADBQ9C0K7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.12■■□□□ 1.13
STRADBQ9C0K7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.11■■□□□ 1.13
STRADBQ9C0K7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms