Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC026202.3-201ENST00000600805 1127 ntBASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDHD3Q9BSH5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HDHD3Q9BSH5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDHD3Q9BSH5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDHD3Q9BSH5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 GPX1-201ENST00000419349 1106 ntBASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.52■□□□□ 0.72
HDHD3Q9BSH5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HDHD3Q9BSH5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.5■□□□□ 0.71
HDHD3Q9BSH5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDHD3Q9BSH5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDHD3Q9BSH5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HDHD3Q9BSH5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 AC009831.1-201ENST00000580420 1582 ntBASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDHD3Q9BSH5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDHD3Q9BSH5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.47■□□□□ 0.71
HDHD3Q9BSH5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 KRT18P10-201ENST00000388836 1287 ntBASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 1115.7 ms